SBIPS

itksnapsb
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itksnapsb is an extension of itk-SNAP version 2.0 and provides additional features to support user landmarking of brain images in 2D and 3D.  This extension has been designed for use with SABRE (Semiautomatic Brain Region Extraction), a method for parcellating structural magnetic resonance images into distinct anatomical regions.

REFERENCES

The original itk-SNAP
:
Yushkevich, P.A., Piven, J.,  Hazlett, H.C., Smith, R.G., Ho, S., Gee, J.C, and Gerig, G. User-guided 3D active contour segmentation of anatomical structures: Significantly improved efficiency and reliability. Neuroimage 2006 Jul 1;31(3):1116-28.

SABRE:
Dade L.A., Gao F.Q., Kovacevic N., Roy P., Rockel C., O'Toole C.M., Lobaugh N.J., Feinstein A., Levine B., and Black S.E.  (2004).  Semiautomatic brain region extraction:  A method of parcellating brain regions from structural magnetic resonance images. Neuroimage, 22, 1492-502.